What Should I Do with Mollie Transactions? They Don’t Match My Invoice One-to-One

Created by Yasmine Seijmonsbergen, Modified on Fri, 21 Feb at 4:45 PM by Dennis van Rooij

When you send an invoice with a payment link (which you can do if you have a Mollie account), the payout transaction will not match the invoice amount one-to-one. 

Our partner Mollie collects these payments and transfers them to your bank account later. However, the transferred amount often does not match the invoice amount exactly. This is because Mollie deducts fees and sometimes combines multiple payments into a single transaction.


You cannot easily link Mollie transactions to the original invoice—but that’s not a problem. Gekko automatically adds a payment for all invoices paid via Mollie, so you don’t have to do anything. This happens in real-time, meaning you can immediately check if a customer has paid via Mollie.

The only thing you need to do is mark the Mollie transaction as "Other": You can do so by clicking on the transaction, then select "Mark as Other".



The transaction will still be recognized as a business transaction, but it won't be linked to a specific receipt or invoice—because Gekko has already done that for you automatically.

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